Test Code BLYM B-Cell Lymphoma, FISH, Tissue
Ordering Guidance
This test does not include a pathology consultation. If a pathology consultation is requested, order PATHC / Pathology Consultation, and appropriate testing will be added at the discretion of the pathologist and performed at an additional charge.
Mayo Hematopathology Consultants are involved in both the pre-analytic (tissue adequacy and probe selection, when applicable) and post-analytic (interpretation of fluorescence in situ hybridization [FISH] results in context of specific case, when applicable) phases.
This assay detects chromosome abnormalities observed in paraffin-embedded tissue samples of patients with B-cell lymphoma. If a non-paraffin embedded bone marrow or blood sample is received for this test, the test will be canceled, and BLPMF / B-Cell Lymphoma, Specified FISH, Varies will be added and performed as the appropriate test.
If either the break-apart MYC or the MYC/IGH D-FISH probe sets are requested in isolation, both probe sets will be performed concurrently to optimize the detection of MYC rearrangements.
For patients with T-cell lymphoma, order TLYM / T-Cell Lymphoma, FISH, Tissue.
Shipping Instructions
Advise Express Mail or equivalent if not on courier service.
Necessary Information
1. A pathology report is required for testing to be performed. If not provided, appropriate testing and/or interpretation may be compromised or delayed. Acceptable pathology reports include working drafts, preliminary pathology, or surgical pathology reports.
2. The following information must be included in the report provided.?
1. Patient name?
2. Block number - must be on all blocks, slides, and paperwork
3. Date of collection
4. Tissue Source
3. A reason for testing must be provided. If this information is not provided, an appropriate indication for testing may be entered by Mayo Clinic Laboratories.
A list of probes is required if select probes are necessary or if the patient is being tracked for known abnormalities. See Table in Clinical Information.
Specimen Required
Submit only 1 of the following specimens:
Preferred
Specimen Type: Tissue block
Collection Instructions: Submit a formalin-fixed, paraffin-embedded tumor tissue block. Blocks prepared with alternative fixation methods will be attempted but are less favorable for successful results; provide fixation method used.
Additional Information:
1. Paraffin-embedded specimens can be from any anatomic location (skin, soft tissue, lymph node, etc).
2. Bone specimens that have been decalcified will be attempted for testing, but the success rate is approximately 50%.
Acceptable
Specimen Type: Tissue slides
Slides: 1 Hematoxylin and eosin stained and 2 unstained?for each probe set
Collection Instructions:
1. Include 1 hematoxylin and eosin-stained slide for the entire test order.
2. For each probe set ordered, submit 2 consecutive, unstained, 5 micron-thick sections placed on positively charged slides.
3. If ordering MYC, 4 unstained slides are necessary; the break-apart MYC and the MYC/IGH D-FISH are performed simultaneously.
Useful For
Detecting recurrent common chromosome abnormalities associated with various B-cell lymphomas in paraffin-embedded tissue specimens at diagnosis
Reflex Tests
Test ID | Reporting Name | Available Separately | Always Performed |
---|---|---|---|
_PRAA | Probe, Each Additional (BLYM) | No, (Bill Only) | No |
Special Instructions
Method Name
Fluorescence In Situ Hybridization (FISH)
Reporting Name
B-cell Lymphoma, FISH, TissueSpecimen Type
TissueSpecimen Minimum Volume
See Specimen Required
Specimen Stability Information
Specimen Type | Temperature | Time | Special Container |
---|---|---|---|
Tissue | Ambient (preferred) | ||
Refrigerated |
Reject Due To
All specimens will be evaluated at Mayo Clinic Laboratories for test suitability.Clinical Information
Mature B-cell lymphoma can be low grade, intermediate grade, or high grade, and the prognosis and clinical course are highly variable. Genetic abnormalities have emerged as one of the most important prognostic markers in B-cell lymphomas and can aid in diagnosis. Several chromosome abnormalities and variants of these abnormalities have been associated with various lymphoma subtypes (see Table). Fluorescence in situ hybridization (FISH) permits the detection of recurrent gene rearrangements associated with various chromosome translocations and inversions in B-cell lymphoma. FISH is available for the specific B-cell lymphoma subtypes; see Table.
Table. Common Chromosome Abnormalities in B-cell Lymphomas
Lymphoma type |
Chromosome abnormality |
FISH probe |
Burkitt (pediatric, ≤18 years old) |
8q24.1 rearrangement |
5'/3' MYC |
t(2;8)(p12;q24.1) |
IGK/MYC |
|
t(8;14)(q24.1;q32) |
MYC/IGH |
|
t(8;22)(q24.1;q11.2) |
MYC/IGL |
|
3q27 rearrangement |
3'/5' BCL6 |
|
18q21 rearrangement |
3'/5' BCL2 |
|
Diffuse large B-cell, "double-hit" |
8q24.1 rearrangement |
5'/3' MYC |
t(8;14)(q24.1;q32) |
MYC/IGH |
|
----Reflex: t(8;22)(q24.1;q11.2) |
MYC/IGL |
|
----Reflex: t(2;8)(p12;q24.1) |
IGK/MYC |
|
----Reflex: 3q27 rearrangement |
3'/5' BCL6 |
|
----Reflex: 18q21 rearrangement |
3'/5' BCL2 |
|
Large BCL IRF4 rearranged |
6p24.3 rearrangement |
5’/3' IRF4 |
18q21 rearrangement |
3'/5' BCL2 |
|
3q27 rearrangement |
3'/5' BCL6 |
|
Follicular |
18q21 rearrangement |
3'/5' BCL2 |
3q27 rearrangement |
3'/5' BCL6 |
|
Predominantly diffuse subtype only: deletion of 1p36 |
TNFRSF14/1q22 |
|
Mantle cell |
t(11;14)(q13;q32) |
CCND1/IGH |
11q13 rearrangement |
5'/3' CCND1 |
|
Blastoid subtype only: deletion of 17p |
TP53/D17Z1 |
|
Blastoid subtype only: 8q24.1 rearrangement |
5'/3' MYC |
|
Cyclin D1-negative subtype only: 12p13.32 rearrangement |
5'/3' CCND2 |
|
MALT |
18q21 rearrangement |
5'/3' MALT1 |
Splenic marginal zone |
Deletion of 7q |
D7Z1/7q32 |
Deletion of 17p |
TP53/D17Z1 |
Reference Values
An interpretive report will be provided.
Day(s) Performed
Monday through Friday
Report Available
4 to 10 daysPerforming Laboratory
Mayo Clinic Laboratories in RochesterTest Classification
This test was developed and its performance characteristics determined by Mayo Clinic in a manner consistent with CLIA requirements. It has not been cleared or approved by the US Food and Drug Administration.CPT Code Information
88377 (if 1 probe set)
88377 x 2 (if 2 probe sets)
88377 x 3 (if 3 probe sets)
88377 x 4 (if 4 probe sets)
88377 x 5 (if 5 probe sets)
88377 x 6 (if 6 probe sets)
Forms
If not ordering electronically, complete, print, and send a Hematopathology/Cytogenetics Test Request (T726) with the specimen.